miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|62427934|gb|DN796128.1|DN796128 CGGGGCCCCTGAGAGCTCCACCTTCAGACTCCACCTCCTCCCTCCACACCGGCTGCTGCTGCTGCTGCTCCTCCTCCTCC
CACTGGCTGTGTTGAGAAAGCTGAACTGTTGAAGGAAGAAGACCGACTGTTCATCTCTACATTAAAGATCTTAACATGGC
GTCGGGAGTAACAGTAGCGGACGGCATTCAGAAAGCCTACTCTGAAATCAAGACCGGCAAGAAGTATAGGTACATGATTT
TCTACATTAAAGACGAGAAGGAGATCGACATAGAGAAATTCGGCGAGAGGGATGAGACGTACGATGATTTCCTCAACTGT
CTGAGCAGCTTAGGACCAGACAAGTGTCGGTATGGTTTGTACGACTTTGAGTACGAGCGCTCCTTCCAAGGAACGTCAGA
ATCCAAGATGAACAAGCTGATCCTCATGTCCTGGTGCCCCGACACTGCCAAGATCAAGACCAAGATGCTCTACTCCACCA
GCTTCAATGCTCTCAAACAGGCACTGGAAGGGATACAGAAGTACATCCAGGCCACTGATATGTCTGAAGCTTCTTATGAG
AGTGTGTTGGAGAAGTGTACTGCTTCAGACCGTGCTTAGAGCCCACCCTTAGGGACACTTTTATACCACCATCCAAGCCA
CTTCACCTGAAGCCTCTTAA




Most similar to sp|P45594|CADF_DROME

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P45594|CADF_DROME Cofilin/actin-depolymerizing factor homolog
           OS=Drosophila melanogaster GN=tsr PE=1 SV=1
          Length = 148

 Score =  189 bits (479), Expect = 2e-47
 Identities = 93/147 (63%), Positives = 114/147 (77%), Gaps = 1/147 (0%)
 Frame = +3

Query: 156 MASGVTVADGIQKAYSEIKTGKKYRYMIFYIKDEKEIDIEKFGERDETYDDFLNCLSSLG 335
           MASGVTV+D  +  Y EIK  KK+RY+IFYI+DEK+ID+E   +R+  YD FL  +   G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 336 PDKCRYGLYDFEYERSFQGTSE-SKMNKLILMSWCPDTAKIKTKMLYSTSFNALKQALEG 512
           P +CRYGL+DFEY    QGTSE SK  KL LMSWCPDTAK+K KMLYS+SF+ALK++L G
Sbjct: 61  PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120

Query: 513 IQKYIQATDMSEASYESVLEKCTASDR 593
           +QKYIQATD+SEAS E+V EK  A+DR
Sbjct: 121 VQKYIQATDLSEASREAVEEKLRATDR 147